Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Species: Synthetic
Genetic Insert: pr.T5-LacO-6xHis-sfGFP
Vector Backbone Description: Backbone Marker:Novagen; Vector Backbone:pET21b(+); Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:32948587
Comments: Please note: This plasmid exists as a multimer. This is not expected to impact the end function of the plasmid. Please refer to the Addgene Blog post on multimers for more information: https://blog.addgene.org/plasmids-101-dimers-and-multimers
Proper citation: RRID:Addgene_159403 Copy
Species: Synthetic
Genetic Insert: pr.T7-sfGFP
Vector Backbone Description: Backbone Marker:iGEM parts registry; Vector Backbone:pSB1A3; Vector Types:Bacterial Expression, Synthetic Biology; Bacterial Resistance:Ampicillin
Defining Citation: PMID:32948587
Proper citation: RRID:Addgene_159404 Copy
Species: Synthetic
Genetic Insert: pr.J23117/J23106-sfGFP
Vector Backbone Description: Backbone Marker:iGEM parts registry; Vector Backbone:pSB1A3; Vector Types:Bacterial Expression, Synthetic Biology; Bacterial Resistance:Ampicillin
Defining Citation: PMID:32948587
Proper citation: RRID:Addgene_159401 Copy
Species: Saccharomyces cerevisiae
Genetic Insert: Ufd2
Vector Backbone Description: Backbone Size:7540; Vector Backbone:pRS425-Gal1; Vector Types:Yeast Expression; Bacterial Resistance:Ampicillin
Proper citation: RRID:Addgene_159522 Copy
Species: Synthetic
Genetic Insert: Termination Module:Linear-2_PolyU(2)
Vector Backbone Description: Vector Backbone:pAV; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33811918
Proper citation: RRID:Addgene_159488 Copy
Species: Synthetic
Genetic Insert: Termination Module:Linear-1_PolyU(8)
Vector Backbone Description: Vector Backbone:pAV; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33811918
Proper citation: RRID:Addgene_159486 Copy
Species: Synthetic
Genetic Insert: Termination Module:Linear-1_PolyU(5)
Vector Backbone Description: Vector Backbone:pAV; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33811918
Proper citation: RRID:Addgene_159483 Copy
Species: Synthetic
Genetic Insert: Termination Module:Linear-1_PolyU(4)
Vector Backbone Description: Vector Backbone:pAV; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33811918
Proper citation: RRID:Addgene_159482 Copy
Species: Synthetic
Genetic Insert: thermostable GFP (TGP)
Vector Backbone Description: Vector Backbone:pET28a; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:33303987
Comments: Full sequence is provided but the depositors have only verified the sequence of the multi-cloning site and the TGP-encoding region by DNA sequencing.
Proper citation: RRID:Addgene_159418 Copy
Species: Synthetic
Genetic Insert: thermostable GFP (TGP)
Vector Backbone Description: Vector Backbone:pYES2; Vector Types:Yeast Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33303987
Comments: Full sequence is provided but the depositors have only verified the sequence of the multi-cloning site and the TGP-encoding region by DNA sequencing.
Proper citation: RRID:Addgene_159419 Copy
Species: Nicotiana benthamiana
Genetic Insert: NbPT5b Promoter
Vector Backbone Description: Backbone Marker:47997 (Sylvestre Marillonnet); Backbone Size:2251; Vector Backbone:pICH41295; Vector Types:Bacterial Expression, pUC19-derived; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:34260583
Proper citation: RRID:Addgene_159416 Copy
Species: Medicago truncatula
Genetic Insert: MtPT4 Promoter
Vector Backbone Description: Backbone Marker:47997 (Sylvestre Marillonnet); Backbone Size:2251; Vector Backbone:pICH41295; Vector Types:Bacterial Expression, pUC19-derived; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:34260583
Proper citation: RRID:Addgene_159414 Copy
Species: Mus musculus
Genetic Insert: pr.tet-BDNF (Bdnf, Mouse)
Vector Backbone Description: Backbone Marker:iGEM parts registry; Vector Backbone:pSB1A3; Vector Types:Bacterial Expression, Synthetic Biology; Bacterial Resistance:Ampicillin
Defining Citation: PMID:32948587
Proper citation: RRID:Addgene_159410 Copy
Species: Synthetic
Genetic Insert: Termination Module:Linear-1_PolyU(4)_HairpinDistance(10)nts
Vector Backbone Description: Vector Backbone:pAV; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33811918
Proper citation: RRID:Addgene_159498 Copy
Species: Mus musculus
Genetic Insert: pr.J23101-BDNF (Bdnf, Mouse)
Vector Backbone Description: Backbone Marker:iGEM parts registry; Vector Backbone:pSB1A3; Vector Types:Bacterial Expression, Synthetic Biology; Bacterial Resistance:Ampicillin
Defining Citation: PMID:32948587
Proper citation: RRID:Addgene_159411 Copy
Species: Synthetic
Genetic Insert: Termination Module:Linear-2_PolyU(1)_HairpinDistance(0)nts
Vector Backbone Description: Vector Backbone:pAV; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33811918
Proper citation: RRID:Addgene_159499 Copy
Species: Synthetic
Genetic Insert: Termination Module:Linear-1_PolyU(1)_HairpinDistance(0)nts
Vector Backbone Description: Vector Backbone:pAV; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33811918
Proper citation: RRID:Addgene_159495 Copy
Species: Synthetic
Genetic Insert: Termination Module:Linear-2_PolyU(7)
Vector Backbone Description: Vector Backbone:pAV; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33811918
Proper citation: RRID:Addgene_159493 Copy
Species: Mus musculus
Genetic Insert: gRNA library targeting mouse core intrinsic immune evasion genes
Vector Backbone Description: Backbone Marker:Jason Moffat; Vector Backbone:pLCKO2; Vector Types:Mammalian Expression, Lentiviral, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:32968282
Proper citation: RRID:Addgene_159391 Copy
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:4682; Vector Backbone:pFastBac1; Vector Types:Insect Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33971243
Comments: - This vector is designed to avoid adding non-native amino acid residues to the protein of interest, following TEV protease cleavage of the N-terminal purification tag. Subcloning requires ligation-independent cloning and use of the two BseRI restriction sites that are present in this empty vector. The two BseRI sites span a removable 432 nucleotide sequence. Cloning into the BseRI-digested vector can be achieved using a ligation-independent system that is dependent on homologous recombination, such as the Takara In-Fusion HD Cloning Plus system, which requires simply designing the PCR-derived insert (containing the protein of interest) to contain 15 bp at each end that matches the 15 bp at each end of the linearized parent vector. In other words, add these 15 bp, AACCTCTACTTCCAA, to the 5' end of the PCR FORWARD primer, and add these 15 bp, AGTACTTCTCGACAA, to the 5' end of the PCR REVERSE primer.
- The sequence of the N-terminus will be MGSS + His10 + ENLYFQ*X, where * is the TEV protease cleavage site and X is the N-terminus of the protein of interest. Note that TEV protease cleaves most efficiently when X = S, G, A, M; for other compatible residues see Kapust et al 2002, PMID 12074568.
- BseRI cuts 8-10 nucleotides outside of its own recognition sequence and is a non-palindromic site. The placement & orientation of the two BseRI sites eliminates all of the BseRI recognition sequence in the resulting subclone.
- An unwanted BseRI site was removed from the parent pFastBac1 vector by introducing a silent mutation (CTC to CTG) in a leucine codon in the gentamicin-resistance gene.
- To identify colonies containing a cloned insert, used the primers PFASTBAC1F (CTAGTGGTTGGCTACGTATACTCCG) and PFASTBAC1R (GGACAAACCACAACTAGAATGCAGTG).
- To verify the PCR-generated insert sequence, use sequencing primers POLYHEDF (AAATGATAACCATCTCGC), SV40PAR (GAAATTTGTGATGCTATTGC).
- To verify Tn7-based incorporation of the expression construct into the bacmid DNA in the E. coli strain DH10Bac, use PCR primers BACM13F (CCCAGTCACGACGTTGTAAAACG) and BACM13R (AGCGGATAACAATTTCACACAGG). A bacmid containing the correct insert has a PCR product size of ~2300 base pairs plus the length of the added insert.
Proper citation: RRID:Addgene_159427 Copy
Can't find your Plasmid?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific plasmid, it's easier to enter an RRID or an Addgene Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your plasmid in the search results, please help us by registering it into the system — it's easy. Register it with Addgene.
Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within dkNET that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.