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Protocol Name
Preparing Data for vContact from Proteins (Cyverse)
DOI:DOI:10.17504/protocols.io.wigfcbw RRID Copied  
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Benjamin Bolduc 2018. Preparing Data for vContact from Proteins (Cyverse). protocols.io https://dx.doi.org/10.17504/protocols.io.wigfcbw
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Protocol Information

URL: https://dx.doi.org/DOI:10.17504/protocols.io.wigfcbw

Authors: Benjamin Bolduc

Group: Sullivan Lab, iVirus

Summary: Preparing data for use in vContact by using VirSorted Ocean Sampling Day (2014) contigs, using tools available in Cyverse. This protocol creates a BLAST DB, BLASTs sequences, and creates a gene-to-contig mapping file. Results from this protocol are suitable for vContact-PCs.

Affiliations: The Ohio State University

External URL: https://dx.doi.org/10.7717/peerj.3243

Version: 4

Publication Date: 2018

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