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Protocol Name
DOI:DOI:10.17504/protocols.io.bnf7mbrn RRID Copied  
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Roey Angel, Eva Petrova 2020. General bacteria and archaea 16S-rRNA (515Fmod-806Rmod) for Illumina amplicon sequencing. protocols.io https://dx.doi.org/10.17504/protocols.io.bnf7mbrn
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Protocol Information

URL: https://dx.doi.org/DOI:10.17504/protocols.io.bnf7mbrn

Authors: Roey Angel, Eva Petrova

Group: SoWa RI Anaerobic and Molecular Microbiology (public)

Summary: Universal 16S rRNA probe-based-qPCR assay for bacteria.The primers target the V4 region of the 16S rRNA gene and were specifically designed for Illumina amplicon sequencing. The original primers were designed by Caporaso et al. (2012) and modified by Walters et al. (2015). For barcoding, we use the Fludigm Access Array for barcoding the sample and therefore the primers are synthisized with the CS1 and CS2 regions.

Affiliations: Soil and Water Research Infrastructure, Soil and Water Research Infrastructure

Version: 2

Publication Date: 2020

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