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Alise Ponsero, Bonnie Hurwitz 2018. Run USEARCH for quality control of a 16s RNA dataset. protocols.io dx.doi.org/10.17504/protocols.io.s8iehueCopy Citation Copied
URL: https://dx.doi.org/10.17504/protocols.io.s8iehue
Authors: Alise Ponsero, Bonnie Hurwitz
Group: Metafunc course 2018
Summary: This protocol explores how to run USEARCH (v11.0.667) (Edgar, 2010) on a 16s RNA dataset.USEARCH is a sequence analysis tool that offers search and clustering algorithms. Here USEARCH will be used to run a quality control on a 16S RNA dataset. This protocol uses a staggered mock community as an example (see attached files).
Affiliations: University of Arizona, University of Arizona
External URL: https://drive5.com/usearch/
Version: 1
Publication Date: 2018
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Source: Protocols.io
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