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Protocol Name
nf-vcf-cataloguer
DOI:10.17504/protocols.io.bkmzku76 RRID Copied  
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Israel Aguilar Ordoñez 2020. nf-vcf-cataloguer. protocols.io dx.doi.org/10.17504/protocols.io.bkmzku76
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Protocol Information

URL: https://dx.doi.org/10.17504/protocols.io.bkmzku76

Authors: Israel Aguilar Ordoñez

Group: Whole genome variation in 27 Mexican indigenous populations, demographic and biomedical insights

Summary: 'nf-vcf-cataloguer' is a tool, implemented in Nextflow, that generates a general table description in TSV format of the description of each category and subgroup of a VCF with the extended annotation made by VEP. Furthermore, it plots each subset of the consequences of variants.

Affiliations: Instituto Nacional de Medicina Genómica (INMEGEN)

External URL: https://github.com/Iaguilaror/nf-VCF-cataloguer

Version: 1

Publication Date: 2020

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Data and Source Information

Source: Protocols.io