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URL: https://github.com/benjjneb/decontam
Proper Citation: decontam (RRID:SCR_028857)
Description: Software R package for the statistical identification and removal of contaminant sequences in marker-gene (e.g. 16S rRNA) and metagenomics sequencing data. Implements frequency- and prevalence-based contaminant identification methods. Used for simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data.
Resource Type: software resource, software toolkit, source code
Defining Citation: PMID:30558668
Keywords: Statistical identification and removal of contaminants, marker gene, metagenomics, sequencing data,
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