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URL: https://sites.google.com/view/brain-mapping
Proper Citation: brain-mapping (RRID:SCR_023845)
Description: Software tool to map histological slice sequences to Allen Mouse Brain Atlas without 3D Reconstruction. Automatically maps histological slice to its corresponding plane in Allen Mouse Brain Atlas to build plane wise mapping and then perform 2D nonrigid registration to build pixel wise mapping.
Resource Type: software resource, software application
Defining Citation: PMID:30618698
Keywords: Allen Mouse Brain Atlas, histological slice, map histological slice sequences to Allen Mouse Brain Atlas, 3D reconstruction,
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