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URL: https://github.com/ncbi/pgap
Proper Citation: Prokaryotic Genomes Automatic Annotation Pipeline (RRID:SCR_021329)
Description: Software tool as NCBI prokaryotic genome annotation pipeline. Used to annotate both complete genomes and draft genomes comprising multiple contigs. Integrated into NCBI infrastructure and processes, and uses modular software framework, GPipe, developed at NCBI for execution of all annotation tasks, from fetching of raw and curated data from public repositories through sequence alignment and model based gene prediction, to submission of annotated genomic data to public NCBI databases.
Abbreviations: PGAP
Synonyms: Prokaryotic Genomes Automatic Annotation Pipeline (PGAP)
Resource Type: software resource, software toolkit
Keywords: NCBI, prokaryotic genome, annotation pipeline, annotate complete genomes, annotate draft genomes, genomes comprising multiple contigs, FASEB list
Availability: Free, Freely available
Resource Name: Prokaryotic Genomes Automatic Annotation Pipeline
Resource ID: SCR_021329
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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