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URL: https://github.com/ngaggion/ChronoRoot
Proper Citation: ChronoRoot (RRID:SCR_021259)
Description: System which combines 3D printed open hardware with deep segmentation networks for high temporal resolution phenotyping of plant roots in agarized medium. Deep learning based root extraction method which leverages the latest advances in convolutional neural networks for image segmentation, and incorporates temporal consistency into the root system architecture reconstruction process.
Resource Type: 2d time-series analysis software, data analysis software, data processing software, image processing software, software application, software resource, time-series analysis software
Keywords: 3D printed open hardware, deep segmentation networks, high temporal resolution phenotyping, plant roots, convolutional neural networks, image segmentation
Availability: Free, Available for download, Freely available
Resource Name: ChronoRoot
Resource ID: SCR_021259
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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