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URL: https://github.com/timbitz/Whippet.jl
Proper Citation: Whippet (RRID:SCR_018349)
Description: Software tool for analysis of Alternative Splicing events and calculation of weighted transcripts per million values TPM on gene level. RNA-seq analysis method that quantifies AS events of any complexity without loss of accuracy. Used for accurate profiling AS to find misregulation present in human diseases.
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:30220560
Keywords: Alternative Splicing analysis, alternative splicing, weighted transcripts values, TPM calculation, gene level, RNA-seq analysis, AS event quantification
Funding: Canada First Excellence Fund ; Canadian Institutes of Health Research ; EMBO Long-Term Fellowship ; Marie Curie IOF Fellowship
Availability: Free, Available for download, Freely available
Resource Name: Whippet
Resource ID: SCR_018349
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
Email: info_at_ dknet.org
