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URL: https://github.com/thackl/cross-species-scaffolding
Proper Citation: Cross-species scaffolding (RRID:SCR_015932)
Description: Software that generates in silico mate-pair reads from single-/paired-end reads of your organism of interest, and a closely related reference genome. It can improve draft genomes by using preferred scaffolding software with the newly created read data. Software that generates in silico mate-pair reads from single-/paired-end reads of your organism of interest, and a closely related reference genome. It can improve draft genomes by using preferred scaffolding software with the newly created read data. Super-scaffolding of draft genome assemblies with in silico mate-pair libraries derived from (closely) related references.
Synonyms: cross-species-scaffolding
Resource Type: data analysis software, data processing software, sequence analysis software, software application, software resource, source code
Keywords: mate, pair, end, reference, genome
Availability: Free, Available for download, Freely available
Resource Name: Cross-species scaffolding
Resource ID: SCR_015932
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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