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URL: http://dlin.web.unc.edu/software/SNPMStat/
Proper Citation: SNPMSTAT (RRID:SCR_013339)
Description: A command-line program for the statistical analysis of SNP-disease association in case-control/cohort/cross-sectional studies with potentially missing genotype data. SNPMStat allows the user to estimate or test SNP effects and SNP-environment interactions by maximizing the (observed-data) likelihood that properly accounts for phase uncertainty, study design and gene-environment dependence. For SNPs without missing data, the program performs the standard association analysis. For typed SNPs with missing data or untyped SNPs, the program performs the maximum-likelihood analysis. (entry from Genetic Analysis Software)
Abbreviations: SNPMSTAT
Synonyms: SNP Missing data STATistics
Resource Type: software resource, software application
Keywords: gene, genetic, genomic
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