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URL: http://www.usadellab.org/cms/index.php?page=trimmomatic
Proper Citation: Trimmomatic (RRID:SCR_011848)
Description: Software Java pipeline for trimming tasks for Illumina paired end and single ended data. Flexible Trimmer for Illumina Sequence Data. Pair aware preprocessing tool optimized for Illumina next generation sequencing data. Includes several processing steps for read trimming and filtering. Operating systems Unix/Linux, Mac OS, Windows.
Abbreviations: Trimmomatic
Synonyms: Trimmomatic v 0.32
Resource Type: data processing software, software application, software resource
Defining Citation: PMID:24695404, DOI:10.1093/bioinformatics/btu170
Keywords: trimming, task, paired, end, single, data, next, generation, sequencing, filtering, bio.tools
Funding: BLE/BMELV Verbundprojekt ; BMBF
Resource Name: Trimmomatic
Resource ID: SCR_011848
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
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