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Resource Name
ChickBase
RRID:SCR_008147 RRID Copied      
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ChickBase (RRID:SCR_008147)
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Resource Information

URL: http://www.thearkdb.org/arkdb/

Proper Citation: ChickBase (RRID:SCR_008147)

Description: This website contains the mapping sequence of poultry. The ArkDB database system aims to provide a comprehensive public repository for genome mapping data from farmed and other animal species. In doing so, it aims to provide a route in to genomic and other sequence from the initial viewpoint of linkage mapping, RH mapping, physical mapping or - possibly more importantly - QTL mapping data. It's supported, in part, by the USDA-CSREES National Animal Genome Research Program in order to serve the poultry genome mapping community. This system represents a complete rewrite of the original version with the code migrated to java and the underlying database targeted at postgres (although any standards-compliant database engine should suffice). The initial release records details of maps and the markers that they contain. There are alternative entry points that target either a chromosome or a specific mapping analysis as the starting point. Limited relationships between markers are recorded and displayed. As with the previous version, all maps are drawn using data extracted from the database on the fly.

Synonyms: Chick Base

Resource Type: database, data or information resource

Keywords: animal, chicken, genome, linkage, map, mapping, marker, meeting, physical, poultry, qtl, rh, sequence, specie

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This resource

has parent organization

Iowa State University; Iowa; USA

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