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Resource Name
Arabidopsis Gene Regulatory Information Server
RRID:SCR_006928 RRID Copied      
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Arabidopsis Gene Regulatory Information Server (RRID:SCR_006928)
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Resource Information

URL: http://arabidopsis.med.ohio-state.edu

Proper Citation: Arabidopsis Gene Regulatory Information Server (RRID:SCR_006928)

Description: An information resource of Arabidopsis promoter sequences, transcription factors and their target genes that contains three databases. *AtcisDB consists of approximately 33,000 upstream regions of annotated Arabidopsis genes (TAIR9 release) with a description of experimentally validated and predicted cis-regulatory elements. *AtTFDB contains information on approximately 1,770 transcription factors (TFs). These TFs are grouped into 50 families, based on the presence of conserved domains. *AtRegNet contains 11,355 direct interactions between TFs and target genes. They provide free download of Arabidopsis thaliana cis-regulatory database (AtcisDB) and transcription factor database (AtTFDB).

Abbreviations: AGRIS

Resource Type: database, data or information resource

Defining Citation: PMID:21059685, PMID:16524982, PMID:12820902

Keywords: gene regulatory, gene, arabidopsis thaliana, promoter sequence, target gene, transcription factor, FASEB list

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has parent organization

Ohio State University; Ohio; USA

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