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URL: http://athina.biol.uoa.gr/orienTM/
Proper Citation: orienTM (RRID:SCR_006218)
Description: A computer software that utilizes an initial definition of transmembrane segments to predict the topology of transmembrane proteins from their sequence. It uses position-specific statistical information for amino acid residues which belong to putative non-transmembrane segments derived from a statistical analysis of non-transmembrane regions of membrane proteins stored in the SwissProt database. Its accuracy compares well with that of other popular existing methods.
Abbreviations: orienTM
Synonyms: orienTM - Orientation of TransMembrane proteins
Resource Type: production service resource, data analysis service, analysis service resource, service resource
Defining Citation: PMID:11477216
Keywords: topology, prediction, transmembrane, protein, segment, algorithm, transmembrane protein
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University of Athens Biophysics and Bioinformatics Laboratory |
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