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URL: http://www.ebi.ac.uk/Tools/dalilite/indexhtml
Proper Citation: DaliLite Pairwise comparison of protein structures (RRID:SCR_003047)
Description: Tool that computes optimal and suboptimal structural alignments between two protein structures. It will compare all chains in the first structure against all chains in the second (unless specific chain IDs are given). The resulting superimposed coordinate files can be downloaded or viewed interactively in Jmol. The Dali method optimizes a weighted sum of similarities of intramolecular distances. Suboptimal alignments do not overlap the optimal alignment or each other. Suboptimal alignments detected by the program are reported if the Z-score is above 2; they may be of interest if there are internal repeats in either structure. SOAP Web services are also available.
Abbreviations: DaliLite
Synonyms: DaliLite - Pairwise alignment of protein structures
Resource Type: analysis service resource, data access protocol, data analysis service, production service resource, service resource, software resource, web service
Defining Citation: PMID:10980157
Keywords: pairwise alignment, protein structure, alignment, protein, structure
Availability: Free, Freely available
Resource Name: DaliLite Pairwise comparison of protein structures
Resource ID: SCR_003047
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
Email: info_at_ dknet.org
