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URL: http://www.bioconductor.org/packages/release/bioc/html/pvca.html
Proper Citation: PVCA (RRID:SCR_001356)
Description: Software package that contains the function to assess the batch sourcs by fitting all sources as random effects including two-way interaction terms in the Mixed Model (depends on lme4 package) to selected principal components, which were obtained from the original data correlation matrix. This package accompanies the book Batch Effects and Noise in Microarray Experiements, chapter 12.
Abbreviations: PVCA
Synonyms: Principal Variance Component Analysis
Resource Type: software resource
Keywords: microarray
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The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant 2U24DK097771-09.
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