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URL: http://sun.aei.polsl.pl/kmc/
Proper Citation: KMC (RRID:SCR_001245)
Description: Software utility for counting k-mers (sequences of consecutive k symbols) in a set of reads from genome sequencing projects. It scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented makes use mostly of disk space rather than RAM, which allows to use KMC even on rather typical personal computers.
Abbreviations: KMC
Synonyms: KMC - K-mer Counter, K-mer Counter
Resource Type: software resource
Defining Citation: PMID:23679007, DOI:10.1093/bioinformatics/btv022
Keywords: c++, k-mer, genome sequencing, linux, windows, de bruijn graph
Availability: Free, Available for download, Freely available
Resource Name: KMC
Resource ID: SCR_001245
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
Email: info_at_ dknet.org
