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URL: https://pm4ngs.readthedocs.io/
Proper Citation: PM4NGS (RRID:SCR_019164)
Description: Software tool to generate standard organizational structure for Next Generation Sequencing data analysis. Includes directory structure for project, several Jupyter notebooks for data management and CWL workflows for pipeline execution.
Synonyms: Project Manager for Next Generation Sequencing
Resource Type: data analysis software, data management software, data processing software, software application, software resource, software toolkit, workflow software
Defining Citation: DOI:10.7490/f1000research.1117155.1
Keywords: NGS workflow, standard organizational structure generation, Next Generation Sequencing data, NGS data analysis, NGS data analysis workflow, data integration, Jupyter notebook, CWL format, bio.tools
Funding: Intramural Research Program of the National Library of Medicine NIH
Availability: Free, Freely available
Resource Name: PM4NGS
Resource ID: SCR_019164
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
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