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URL: http://pklab.med.harvard.edu/scde/pagoda.links.html
Proper Citation: PAGODA (RRID:SCR_017099)
Description: Software tool for analyzing transcriptional heterogeneity to detect statistically significant ways in which measured cells can be classified. Used to resolve multiple, potentially overlapping aspects of transcriptional heterogeneity by testing gene sets for coordinated variability among measured cells.
Synonyms: Pathway And Gene set OverDispersion Analysis, pagoda
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:26780092
Keywords: heterogeneity, transcriptional, detect, statistically, cell, classified, overlapping, gene, set, coordinated, variability
Funding: Ellison Medical Foundation ; NIA T32 AG00216; NIMH U01 MH098977; NINDS R01 NS084398; NSF DGE1144152; NSF NSF-14-532
Availability: Free, Available for download, Freely available
Resource Name: PAGODA
Resource ID: SCR_017099
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
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