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URL: https://bitbucket.org/nsegata/phylophlan/wiki/Home
Proper Citation: PhyloPhlAn (RRID:SCR_013082)
Description: Software pipeline for reconstructing highly accurate and resolved phylogenetic trees based on whole-genome sequence information. Pipeline is scalable to thousands of genomes and uses the most conserved 400 proteins for extracting the phylogenetic signal. PhyloPhlAn also implements taxonomic curation, estimation, and insertion operations., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Abbreviations: PhyloPhlAn
Synonyms: PhyloPhlAn: microbial Tree of Life using 400 universal proteins
Resource Type: software resource
Defining Citation: PMID:23942190
Keywords: phylogenetic tree, whole-genome sequence, genome, protein
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: PhyloPhlAn
Resource ID: SCR_013082
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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