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URL: http://www.ebi.ac.uk/research/enright/software/kraken
Proper Citation: Kraken (RRID:SCR_005484)
Description: A set of software tools ( Reaper, Tally and Sequence Imp) designed to streamline the analysis of next-generation sequencing data. Although designed with small RNA sequence analysis in mind the tools can be used to address issues facing next-generation sequencing in general.
Abbreviations: Kraken
Synonyms: Kraken: A set of tools for quality control and analysis of high-throughput sequence data
Resource Type: software resource
Defining Citation: PMID:23816787
Keywords: adapter trimming, algorithm, next-generation sequencing, pipeline, rnaseq, sequencing
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The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant 2U24DK097771-09.
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