• Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

Animal QTLdb

Database of trait mapping data, i.e. QTL (phenotype / expression, eQTL), candidate gene and association data (GWAS) and copy number variations (CNV) mapped to livestock animal genomes, to facilitate locating and comparing discoveries within and between species. New data and database tools are continually developed to align various trait mapping data to map-based genome features, such as annotated genes. QTLdb is open to house QTL/association date from other animal species where feasible. Most scientific journals require that any original QTL/association data be deposited into public databases before paper may be accepted for publication. User curator accounts are provided for direct data deposit. Users can download QTLdb data from each species or individual chromosome.


Details

  • Resource Type: Resource, service resource, data or information resource, data repository, storage service resource, database
  • Keywords: chromosome, comparative genomics, dna sequence, genome, livestock, quantitative trait locus, non-human animal, structural genomics, single-nucleotide polymorphism, gene association, genomics, trait, copy number variation, trait, phenotype, expression, eqtl, genome wide association study, candidate gene, genotype
  • Resource ID: SCR_001748
  • Proper Citation: (Animal QTLdb, RRID:SCR_001748)
  • Parent Organization: Iowa State University; Iowa; USA , NAGRP Bioinformatics Coordination Program
  • Related Condition:
  • Funding Agency: USDA
  • Relation: related to: Ensembl Variation, Vertebrate Trait Ontology, used by: Monarch Initiative, NIF Data Federation, uses: Entrez Gene, Ensembl, listed by: re3data.org
  • Reference: PMID:17245610, PMID:23180796
  • Website Status: Last checked up
  • Alternate IDs: nif-0000-02550
  • Alternate URLs: http://www.animalgenome.org/QTLdb/
  • Old URLs:
  • v_uuid: a2f71675-c3b1-5510-a407-5742b7b001b3
License URL:
License Information: